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Carbonless amino acids and a carbonless GHK peptide.

Skurski P, Anusiewicz I.
Physical chemistry chemical physics : PCCP · April 16, 2026
Plain-language summary

This computational study introduces the concept of "carbonless" biomolecular design, in which all carbon atoms in amino acids and peptides are systematically replaced by boron and nitrogen atoms under an isoelectronicity constraint. Using glycine, histidine, lysine, and the copper-binding tripeptide Gly-His-Lys (GHK) as model systems, the researchers applied density functional theory (DFT) calculations with aqueous solvation modeling and conformer sampling to identify the most stable carbonless analogues (cGly, cHis, cLys, and cGHK) among all possible boron-nitrogen constitutional isomers. The study predicted that cGHK displays a broader conformational landscape than native GHK under physiological aqueous conditions, suggesting enhanced structural flexibility. Copper(II) binding was modeled using an experimentally informed coordination motif, and thermodynamic calculations indicated that cGHK binds Cu(II) more favorably than GHK by approximately 6.24 kcal/mol. The work is entirely theoretical; no synthesis, cell-based, animal, or human experiments were conducted. Limitations include the absence of experimental validation of the proposed carbonless structures, reliance on computational approximations for solvation and conformational sampling, and uncertainty about whether these novel BN-substituted molecules could be synthesized or would exhibit biological stability.

Why this grade: The study is entirely computational (DFT and semi-empirical modeling) with no experimental, animal, or human data, providing no direct evidence of biological activity or efficacy in any living system.

Ask the literature about GHK-Cu
Abstract

Carbonless biomolecular design, in which carbon atoms are systematically replaced by boron and nitrogen under an isoelectronicity constraint, offers a route to carbon free analogues that retain the structural logic of familiar biochemistry. The concept is applied to amino acids and peptides, using glycine, histidine, lysine, and the tripeptide Gly-His-Lys (GHK) as a representative system. DFT(ωB97XD)/aug-cc-pVDZ calculations with aqueous PCM solvation, supported by CREST conformer sampling at the GFN2-xTB/ALPB level, identify unique low energy carbonless building blocks, cGly, cHis, and cLys, defined as carbonless analogues of Gly, His, and Lys among all isoelectronic BN constitutional isomers. These residues enable construction of cGHK, defined as the carbonless analogue of GHK, whose conformational landscape is predicted to be broader than that of GHK under physiological aqueous conditions, consistent with enhanced conformational plasticity. Cu(II) complexation is modeled with an experimentally supported 3N1O motif including one explicit water ligand, and an isodesmic ligand exchange thermodynamic cycle based on ensemble Gibbs free energies indicates stronger stabilization of Cu(II) by cGHK than by GHK (Δ G exch = -6.24 kcal mol -1 at 298 K), with only a minor ensemble correction. The results demonstrate the feasibility of carbonless amino acids and peptides and show that BN substitution can tune conformational behavior and metal binding thermodynamics in carbon free bioinspired scaffolds.

Educational summary of published research — not medical advice. Full text is shown only where licensing permits.